COMPUTATIONAL ANALYSIS: here we provide resources to facilitate computational analysis of high-dimensional cytometry data, including Spectre, an R package that enables comprehensive end-to-end integration and analysis of high-dimensional cytometry data from different batches or experiments.
Spectre R package:
- Pre-print: Ashhurst*, Marsh-Wakefield*, Putri* et al. bioRxiv. 2020.
- Protocols and instructions: website.
- Presentation on Spectre at Oz Single Cell 2020, ‘Computational Biology’: Youtube.
Webinars and tutorials:
- Talk on clustering and dimensionality reduction at the ACS ‘homeshow’: Youtube.
- Clustering and dimensionality reduction approaches in FlowJo: Tutorial